Example usage for org.apache.shiro SecurityUtils getSubject

List of usage examples for org.apache.shiro SecurityUtils getSubject

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Introduction

In this page you can find the example usage for org.apache.shiro SecurityUtils getSubject.

Prototype

public static Subject getSubject()

Source Link

Document

Returns the currently accessible Subject available to the calling code depending on runtime environment.

Usage

From source file:au.org.theark.study.web.component.consent.form.DetailForm.java

License:Open Source License

/**
 * Initialise the Consent StudyComp Drop Down Choice Control
 *//*from www .  j av a  2  s .  c  o m*/
@SuppressWarnings("unchecked")
protected void initStudyComponentChoice() {
    Long sessionStudyId = (Long) SecurityUtils.getSubject().getSession()
            .getAttribute(au.org.theark.core.Constants.STUDY_CONTEXT_ID);
    Long sessionPersonId = (Long) SecurityUtils.getSubject().getSession()
            .getAttribute(au.org.theark.core.Constants.PERSON_CONTEXT_ID);
    Study study = iArkCommonService.getStudy(sessionStudyId);

    LinkSubjectStudy linkSubjectStudy = null;

    try {
        if (sessionPersonId != null) {
            linkSubjectStudy = iStudyService.getSubjectLinkedToStudy(sessionPersonId, study);
        } else {
            throw new EntityNotFoundException("The subject selected does not exist in system.");
        }
    } catch (EntityNotFoundException e) {
        containerForm.error("The subject selected no longer exists in the system. Please re-do the operation.");
    } catch (ArkSystemException e) {
        containerForm.error("A system error has occurred. Please contact the system administrator.");
    }
    List<StudyComp> studyCompList = iArkCommonService.getStudyComponentByStudy(study);
    //Used a different approch on 2016-08-16
    //List<StudyComp> studyCompList = iArkCommonService.getStudyComponentsNotInThisSubject(study,linkSubjectStudy);
    ChoiceRenderer<StudyComp> defaultChoiceRenderer = new ChoiceRenderer<StudyComp>(Constants.NAME,
            Constants.ID);
    studyComponentChoice = new DropDownChoice<StudyComp>(Constants.CONSENT_STUDY_COMP, studyCompList,
            defaultChoiceRenderer) {
        private static final long serialVersionUID = 1L;

        @Override
        protected void onBeforeRender() {
            if (isNew()) {
                setEnabled(true);
            } else {
                setEnabled(false);
            }
            super.onBeforeRender();
        }
    };
    studyComponentChoice.add(new ArkDefaultFormFocusBehavior());
    studyComponentChoice.add(new AjaxFormComponentUpdatingBehavior("onchange") {

        private static final long serialVersionUID = 1L;

        @Override
        protected void onUpdate(AjaxRequestTarget target) {
            Long sessionStudyId = (Long) SecurityUtils.getSubject().getSession()
                    .getAttribute(au.org.theark.core.Constants.STUDY_CONTEXT_ID);
            Long sessionPersonId = (Long) SecurityUtils.getSubject().getSession()
                    .getAttribute(au.org.theark.core.Constants.PERSON_CONTEXT_ID);

            LinkSubjectStudy linkSubjectStudy = null;

            try {
                Study study = iArkCommonService.getStudy(sessionStudyId);
                Person subject = iStudyService.getPerson(sessionPersonId);
                if (sessionPersonId != null) {
                    linkSubjectStudy = iStudyService.getSubjectLinkedToStudy(sessionPersonId, study);
                } else {
                    throw new EntityNotFoundException("The subject selected does not exist in system.");
                }
                boolean isConsented = iArkCommonService
                        .isSubjectConsentedToComponent(studyComponentChoice.getModelObject(), subject, study);
                processErrors(target);
                if (isConsented) {
                    StringBuffer sb = new StringBuffer();

                    //sb.append("Please choose another component. The Subject has already consented to Component: ");
                    //sb.append(studyComponentChoice.getModelObject().getName());
                    sb.append("A study component of this type already exists for subject ");
                    sb.append(linkSubjectStudy.getSubjectUID());
                    containerForm.error(sb.toString());
                    //Stopping save with exsisting components.
                    arkCrudContainerVO.getEditButtonContainer().get("save").setEnabled(false);
                    target.add(arkCrudContainerVO.getEditButtonContainer());
                    processErrors(target);
                } else {
                    arkCrudContainerVO.getEditButtonContainer().get("save").setEnabled(true);
                    target.add(arkCrudContainerVO.getEditButtonContainer());
                }
            } catch (EntityNotFoundException e) {
                containerForm.error(
                        "The subject selected no longer exists in the system.Please re-do the operation.");

            } catch (ArkSystemException e) {
                containerForm.error("A system error has occurred. Please contact the system administrator.");
            }
        }
    });
}

From source file:au.org.theark.study.web.component.consent.form.DetailForm.java

License:Open Source License

@Override
protected void onSave(Form<ConsentVO> containerForm, AjaxRequestTarget target) {
    boolean isOkToSave = true;
    boolean isOkToSaveOnAttachment = true;
    Consent exsistingConsent = containerForm.getModelObject().getConsent();
    if (!isRequestedReceivedCompletedInOrder(exsistingConsent)) {
        isOkToSave = false;//from  ww  w  .  ja  va2  s. c  o  m
    }
    //Check for the saving ability or update the consent according to the attached file.
    //Check for already attached file
    if (iStudyService.isAlreadyHasFileAttached(exsistingConsent.getLinkSubjectStudy(),
            exsistingConsent.getStudyComp())) {
        //New filed attached
        if (isNewFileAttached()) {
            // if attached check the new file and db recorded one equal and let them to save
            if (isSameCheckSumOfAttachedAgainstDbRecorded(exsistingConsent.getLinkSubjectStudy(),
                    exsistingConsent.getStudyComp())) {
                isOkToSaveOnAttachment = true;
                //else do not allow to save    
            } else {
                isOkToSaveOnAttachment = false;
                this.error("The Consent record you tried to update has already been assigned attachment.");
                processErrors(target);
            }
            // if not new attached let them to save with other conditions    
        } else {
            isOkToSaveOnAttachment = true;
        }
        //if not already attached file in the db let them to save.    
    } else {
        isOkToSaveOnAttachment = true;
    }
    if (isOkToSave && isOkToSaveOnAttachment) {
        try {
            // Study in Context
            Long studyId = (Long) SecurityUtils.getSubject().getSession()
                    .getAttribute(au.org.theark.core.Constants.STUDY_CONTEXT_ID);
            Study study = iArkCommonService.getStudy(studyId);
            containerForm.getModelObject().getConsent().setStudy(study);
            if (containerForm.getModelObject().getConsent().getId() == null) {
                iStudyService.create(containerForm.getModelObject().getConsent());
                this.saveInformation();
                //this.info("Consent was successfuly created for the Subject ");
                createConsentFile();
                processErrors(target);
                // Store session object (used for history)
                SecurityUtils.getSubject().getSession().setAttribute(
                        au.org.theark.core.Constants.PERSON_CONTEXT_CONSENT_ID,
                        containerForm.getModelObject().getConsent().getId());
            } else {
                boolean consentFile = fileUploadField.getFileUpload() != null;
                iStudyService.update(containerForm.getModelObject().getConsent(), consentFile);
                if (isNewFileAttached()
                        && !iStudyService.isAlreadyHasFileAttached(exsistingConsent.getLinkSubjectStudy(),
                                exsistingConsent.getStudyComp())) {
                    createConsentFile();
                }
                //Check for consent file upload   
                this.updateInformation();
                //this.info("Consent was successfuly updated for the Subject ");
                processErrors(target);
            }
        } catch (EntityNotFoundException e) {
            this.error("The Consent record you tried to update is no longer available in the system.");
            processErrors(target);
        } catch (ArkSystemException e) {
            this.error(e.getMessage());
            processErrors(target);
        } finally {
            onSavePostProcess(target);
        }
    } else {
        processErrors(target);
    }
}

From source file:au.org.theark.study.web.component.consent.form.DetailForm.java

License:Open Source License

private void createConsentFile() throws ArkSystemException {
    FileUpload fileSubjectFile = fileUploadField.getFileUpload();
    if (fileSubjectFile != null) {
        LinkSubjectStudy linkSubjectStudy = null;
        Long studyId = (Long) SecurityUtils.getSubject().getSession()
                .getAttribute(au.org.theark.core.Constants.STUDY_CONTEXT_ID);
        Study study = iArkCommonService.getStudy(studyId);
        Long sessionPersonId = (Long) SecurityUtils.getSubject().getSession()
                .getAttribute(au.org.theark.core.Constants.PERSON_CONTEXT_ID);

        try {//from   w  ww .  j  ava  2 s . c  om
            linkSubjectStudy = iArkCommonService.getSubject(sessionPersonId, study);
            if (containerForm.getModelObject().getSubjectFile() == null) {
                containerForm.getModelObject().setSubjectFile(new SubjectFile());
            }
            containerForm.getModelObject().getSubjectFile().setLinkSubjectStudy(linkSubjectStudy);
            containerForm.getModelObject().getSubjectFile()
                    .setPayload(IOUtils.toByteArray(fileSubjectFile.getInputStream()));

            byte[] byteArray = fileSubjectFile.getMD5();
            String checksum = getHex(byteArray);

            // Set details of Consent File object
            containerForm.getModelObject().getSubjectFile()
                    .setStudyComp(containerForm.getModelObject().getConsent().getStudyComp());
            containerForm.getModelObject().getSubjectFile()
                    .setComments(containerForm.getModelObject().getConsent().getComments());
            containerForm.getModelObject().getSubjectFile().setChecksum(checksum);
            containerForm.getModelObject().getSubjectFile().setFilename(fileSubjectFile.getClientFileName());
            containerForm.getModelObject().getSubjectFile()
                    .setUserId(SecurityUtils.getSubject().getPrincipals().getPrimaryPrincipal().toString());
            containerForm.getModelObject().getSubjectFile().setIsConsentFile(true);

            // Save
            iStudyService.create(containerForm.getModelObject().getSubjectFile(),
                    Constants.ARK_SUBJECT_CONSENT_DIR);
            //this.saveInformation();
            //No need of this cause it's calling at the actual consent object creation or update.
            //this.info("Consent file: " + containerForm.getModelObject().getSubjectFile().getFilename() + " was created successfully");
        } catch (IOException ioe) {
            log.error("Failed to save the uploaded file: " + ioe);
        } catch (EntityNotFoundException e) {
            log.error(e.getMessage());
        }
    }
}

From source file:au.org.theark.study.web.component.consent.form.SearchForm.java

License:Open Source License

public SearchForm(String id, PageableListView<Consent> listView, FeedbackPanel feedBackPanel,
        CompoundPropertyModel<ConsentVO> model, ArkCrudContainerVO arkCrudContainerVO) {
    super(id, model, feedBackPanel, arkCrudContainerVO);

    this.cpmModel = model;
    this.pageableListView = listView;
    // initialiseSearchForm();
    // addSearchComponentsToForm();
    Label generalTextLbl = new Label("generalLbl",
            new StringResourceModel("search.panel.text", new Model<String>()));
    add(generalTextLbl);/*  w w w  .j  a  v a  2  s  .  c o  m*/
    resetButton.setVisible(false);
    searchButton.setVisible(false);
    Long sessionPersonId = (Long) SecurityUtils.getSubject().getSession()
            .getAttribute(au.org.theark.core.Constants.PERSON_CONTEXT_ID);
    disableSearchForm(sessionPersonId, au.org.theark.core.Constants.MESSAGE_NO_SUBJECT_IN_CONTEXT);
}

From source file:au.org.theark.study.web.component.consent.form.SearchForm.java

License:Open Source License

/**
 * Initialise the Consent StudyComp Drop Down Choice Control
 *///  w ww  .  ja  v a  2 s . co m
protected void initialiseComponentChoice() {
    Long sessionStudyId = (Long) SecurityUtils.getSubject().getSession()
            .getAttribute(au.org.theark.core.Constants.STUDY_CONTEXT_ID);
    Study study = iArkCommonService.getStudy(sessionStudyId);
    List<StudyComp> studyCompList = iArkCommonService.getStudyComponentByStudy(study);
    ChoiceRenderer<StudyComp> defaultChoiceRenderer = new ChoiceRenderer<StudyComp>(Constants.NAME,
            Constants.ID);
    studyComponentChoice = new DropDownChoice<StudyComp>(Constants.CONSENT_STUDY_COMP, studyCompList,
            defaultChoiceRenderer);
}

From source file:au.org.theark.study.web.component.consent.form.SearchForm.java

License:Open Source License

@Override
protected void onSearch(AjaxRequestTarget target) {
    target.add(feedbackPanel);//  w w w . ja va2 s .  c  o m
    Long sessionStudyId = (Long) SecurityUtils.getSubject().getSession()
            .getAttribute(au.org.theark.core.Constants.STUDY_CONTEXT_ID);
    Long sessionPersonId = (Long) SecurityUtils.getSubject().getSession()
            .getAttribute(au.org.theark.core.Constants.PERSON_CONTEXT_ID);
    // session
    Consent consent = getModelObject().getConsent();

    try {
        Study study = iArkCommonService.getStudy(sessionStudyId);
        // Person subject = studyService.getPerson(sessionPersonId);

        // consent.setSubject(subject);
        // TODO Replace the above line with a call to LinkSubjectStudy
        consent.setStudy(study);

        // Look up based on criteria via back end.
        // Collection<Consent> consentList = studyService.searchConsent(getModelObject().getConsent());
        LinkSubjectStudy subjectInContext = studyService.getSubjectLinkedToStudy(sessionPersonId, study);
        consent.setLinkSubjectStudy(subjectInContext);
        Collection<Consent> consentList = studyService.searchConsent(getModelObject());

        if (consentList != null && consentList.size() == 0) {
            this.info("There are no consents for the specified search criteria.");
            target.add(feedbackPanel);
        }

        getModelObject().setConsentList(consentList);
        pageableListView.removeAll();

        arkCrudContainerVO.getSearchResultPanelContainer().setVisible(true);
        target.add(arkCrudContainerVO.getSearchResultPanelContainer());
    } catch (EntityNotFoundException e) {
        // TODO Auto-generated catch block
        e.printStackTrace();
    } catch (ArkSystemException e) {
        // TODO Auto-generated catch block
        e.printStackTrace();
    }
}

From source file:au.org.theark.study.web.component.consent.form.SearchForm.java

License:Open Source License

@Override
protected void onNew(AjaxRequestTarget target) {
    // ARK-108:: no longer do full reset to VO
    // Remove session object
    super.onNew(target);
    SecurityUtils.getSubject().getSession()
            .removeAttribute(au.org.theark.core.Constants.PERSON_CONTEXT_CONSENT_ID);
    preProcessDetailPanel(target);/*w  w w  . jav  a  2  s . c  om*/
}

From source file:au.org.theark.study.web.component.consent.SearchResultListPanel.java

License:Open Source License

private AjaxLink<String> buildLink(final Consent consent) {
    ArkBusyAjaxLink<String> link = new ArkBusyAjaxLink<String>("studyComp.name") {
        private static final long serialVersionUID = 1L;

        @Override//from   w  w w . j a  va 2  s.  c  om
        public void onClick(AjaxRequestTarget target) {
            Long id = consent.getId();
            try {
                Session.get().cleanupFeedbackMessages();
                target.add(feedbackPanel);
                Consent consentFromBackend = studyService.getConsent(id);
                containerForm.getModelObject().setConsent(consentFromBackend);
                //Subject file need to be populated in here.
                containerForm.getModelObject().setSubjectFile(studyService.getSubjectFileParticularConsent(
                        consentFromBackend.getLinkSubjectStudy(), consentFromBackend.getStudyComp()));
                // Add consentId into context (for use with consentFile(s))
                SecurityUtils.getSubject().getSession().setAttribute(
                        au.org.theark.core.Constants.PERSON_CONTEXT_CONSENT_ID, consentFromBackend.getId());
                WebMarkupContainer wmcPlain = (WebMarkupContainer) arkCrudContainerVO
                        .getDetailPanelFormContainer().get(Constants.WMC_PLAIN);
                WebMarkupContainer wmcRequested = (WebMarkupContainer) arkCrudContainerVO
                        .getDetailPanelFormContainer().get(Constants.WMC_REQUESTED);
                WebMarkupContainer wmcRecieved = (WebMarkupContainer) arkCrudContainerVO
                        .getDetailPanelFormContainer().get(Constants.WMC_RECIEVED);
                WebMarkupContainer wmcCompleted = (WebMarkupContainer) arkCrudContainerVO
                        .getDetailPanelFormContainer().get(Constants.WMC_COMPLETED);

                new FormHelper().updateStudyCompStatusDates(target,
                        consentFromBackend.getStudyComponentStatus().getName(), wmcPlain, wmcRequested,
                        wmcRecieved, wmcCompleted);
                ArkCRUDHelper.preProcessDetailPanelOnSearchResults(target, arkCrudContainerVO);
            } catch (ArkSystemException e) {
                containerForm.error("A system error has occurred. Please contact the system administrator.");
            }
        }
    };
    Label nameLinkLabel = new Label(Constants.CONSENT_COMPONENT_LABEL, consent.getStudyComp().getName());
    link.add(nameLinkLabel);
    return link;
}

From source file:au.org.theark.study.web.component.consenthistory.ConsentHistoryPanel.java

License:Open Source License

private void initConsentHistoryPanel() {
    IModel<Object> model = new LoadableDetachableModel<Object>() {

        private static final long serialVersionUID = 1L;

        @Override/*from ww  w  .  j a va2  s . c  o  m*/
        protected Object load() {
            List<ConsentHistory> consentHistoryList = new ArrayList<ConsentHistory>();
            Consent consent = new Consent();
            try {
                Long sessionConsentId = (Long) SecurityUtils.getSubject().getSession()
                        .getAttribute(au.org.theark.core.Constants.PERSON_CONTEXT_CONSENT_ID);
                if (sessionConsentId != null) {
                    consent = iStudyService.getConsent(sessionConsentId);
                }
                consentHistoryList = iStudyService.getConsentHistoryList(consent);
            } catch (ArkSystemException e) {
                e.printStackTrace();
            }

            listView.removeAll();
            return consentHistoryList;
        }
    };
    listView = buildListView(model);
    pageNavigator = new PagingNavigator("navigator", listView);
}

From source file:au.org.theark.study.web.component.consenthistory.LinkSubjectStudyConsentHistoryPanel.java

License:Open Source License

private void initConsentHistoryPanel() {
    IModel<Object> model = new LoadableDetachableModel<Object>() {

        private static final long serialVersionUID = 1L;

        @Override//from w w  w. j  av a 2s . c o m
        protected Object load() {
            List<LssConsentHistory> consentHistoryList = new ArrayList<LssConsentHistory>();
            LinkSubjectStudy linkSubjectStudy = null;
            try {
                String subjectUid = (String) SecurityUtils.getSubject().getSession()
                        .getAttribute(au.org.theark.core.Constants.SUBJECTUID);
                Long sessionStudyId = (Long) SecurityUtils.getSubject().getSession()
                        .getAttribute(au.org.theark.core.Constants.STUDY_CONTEXT_ID);
                linkSubjectStudy = iArkCommonService.getSubjectByUID(subjectUid,
                        iArkCommonService.getStudy(sessionStudyId));
                consentHistoryList = iStudyService.getLssConsentHistoryList(linkSubjectStudy);
            } catch (EntityNotFoundException e) {
                e.printStackTrace();
            }

            listView.removeAll();
            return consentHistoryList;
        }
    };
    listView = buildListView(model);
    pageNavigator = new PagingNavigator("navigator", listView);
}