Download NDEx Site Free Java Code

.gitignore//from w ww . j ava  2  s  .  co m
README.md
config/rest_config_template.json
css/bootstrap-responsive.css
css/bootstrap-responsive.min.css
css/bootstrap.css
css/bootstrap.min.css
css/compare_networks.css
css/ndex-site.css
css/ndex-site.css.orig
css/ndex_api.css
css/visualize_network.css
generate/api_spec.js
generate/client_api_footer.js
generate/client_api_header.js
generate/generate.js
generate/generate_client.js
generate/generate_html.js
generate/generate_python_client.js
generate/generate_rest.js
generate/generate_wiki.js
generate/python_client_header.py
generate/rest_footer.js
generate/rest_header.js
generate/wiki.js
img/background/dexterpratt.jpg
img/background/idekerlab.jpg
img/background/nci_nature.gif
img/background/reactome.png
img/background/triptychjs.jpg
img/close_icon.png
img/copyright2012.png
img/expand_icon.png
img/fly_icon.png
img/foreground/dexterpratt.jpg
img/foreground/name.jpg
img/foreground/nci_nature.png
img/foreground/treyideker.jpg
img/foreground/triptychjs.jpg
img/glyphicons-halflings-white.png
img/glyphicons-halflings.png
img/increaseDot.png
img/logo.png
img/triptych_logo_large.png
img/triptych_logo_large_white.png
img/zoom_in_icon.png
img/zoom_out_icon.png
js/async.js
js/backbone.js
js/bootstrap.js
js/bootstrap.min.js
js/cytoscape.js
js/d3.v3.js
js/highcharts.js
js/jdex.js
js/jdex_old.js
js/jquery-1.10.2.min.js
js/ndexClient.js
js/ndexUI.js
js/ndex_api_spec.js
js/sigma.concat.js
js/three/RequestAnimationFrame.js
js/three/Three.js
js/triptych/Controls/BasicControls-1.1.3.js
js/triptych/Core/Triptych-1.1.4.js
js/triptych/GraphLoader/BasicGraphLoader-1.1.4.js
js/triptych/GraphLoader/JDExGraphLoader
js/triptych/GraphLoader/JDExGraphLoader.js
js/triptych/LayoutEngine/ForceDirectedLayoutEngine-1.1.2.js
js/triptych/LayoutEngine/MP2LayoutEngine-1.1.1.js
js/triptych/LayoutEngine/MP2LayoutEngine-1.1.1.min.js
js/triptych/LayoutEngine/MP3LayoutEngine.js
js/triptych/Visualizer/BEL3DCanvasVisualizer-1.1.1.js
js/triptych/Visualizer/BEL3DVisualizer-1.1.1.js
js/triptych/Visualizer/BELMPCanvasVisualizer-1.1.2.js
js/triptych/Visualizer/BELMPVisualizer-1.1.2.js
js/triptych/Visualizer/CanvasVisualizer-1.1.4.js
js/triptych/Visualizer/TwoPlaneVisualizer
js/triptych/Visualizer/TwoPlaneVisualizer.js
js/triptych/Visualizer/WebGLVisualizer-1.1.3.js
js/underscore.js
package.json
routes/Agent.js
routes/Common.js
routes/Group.js
routes/Network.js
routes/Request.js
routes/System.js
routes/Task.js
routes/User.js
routes/index.js
site.js
test_db/archive/group_ideker_lab.js
test_db/archive/group_nci_nature.js
test_db/archive/group_reactome.js
test_db/build_test_db.js
test_db/build_test_db_2.js
test_db/download_pc_sif.js
test_db/generate_large_bel_jdex.js
test_db/ndex_modules/ndex-request.js
test_db/package.json
test_db/test_accounts/user_dexter.json
test_db/test_networks/bel/small_corpus.jdex
test_db/test_networks/pc_sif/CELL_MAP.TGFBR.544338.jdex
test_db/test_networks/pc_sif/NCI_NATURE.FoxO family signaling.517135.jdex
test_db/test_networks/pc_sif/REACTOME.Cyclin D associated events in G1.485628.jdex
test_db/test_networks/pc_sif/REACTOME.G0 and Early G1.485619.jdex
test_db/test_networks/pc_sif/REACTOME.G1 Phase.485618.jdex
test_db/test_networks/pc_sif/testNetwork.jdex
test_db/test_networks/pc_sif/testNetwork_old.jdex
unit_test/README.md
unit_test/archive/scratch.js
unit_test/archive/test.js
unit_test/archive/user-image-test.js
unit_test/ndex_modules/ndex-request.js
unit_test/package.json
unit_test/test/authentication-test.js
unit_test/test/find-networks-test.js
unit_test/test/group-basic-test.js
unit_test/test/group-members-test.js
unit_test/test/group-profile-test.js
unit_test/test/network-basic-test.js
unit_test/test/network-bel-test.js
unit_test/test/status-test.js
unit_test/test/task-basic-test.js
unit_test/test/user-basic-test.js
unit_test/test/user-profile-test.js
unit_test/test/user-workspace-test.js
views/about.ejs
views/api_spec.ejs
views/contact.ejs
views/create_group.ejs
views/cyjs_visualize_network.ejs
views/edit_agent.ejs
views/edit_group_profile.ejs
views/edit_network_metadata.ejs
views/edit_profile.ejs
views/foot.ejs
views/group_invite.ejs
views/head.ejs
views/home.ejs
views/join.ejs
views/login.ejs
views/nav.ejs
views/new_task.ejs
views/policy.ejs
views/request.ejs
views/search_groups.ejs
views/search_networks.ejs
views/search_users.ejs
views/show_tasks.ejs
views/sidebar.ejs
views/triptych_compare_networks.ejs
views/upload_network.ejs
views/view_group.ejs
views/view_network.ejs
views/view_user.ejs